Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12d-3A0A075B6A4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12d-3A0A075B6A4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12d-3A0A075B6A4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12d-3A0A075B6A4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav12d-3A0A075B6A4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12d-3A0A075B6A4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12d-3A0A075B6A4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12d-3A0A075B6A4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12d-3A0A075B6A4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12d-3A0A075B6A4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav12d-3A0A075B6A4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav12d-3A0A075B6A4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav12d-3A0A075B6A4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12d-3A0A075B6A4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12d-3A0A075B6A4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12d-3A0A075B6A4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
Trav12d-3A0A075B6A4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12d-3A0A075B6A4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12d-3A0A075B6A4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12d-3A0A075B6A4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12d-3A0A075B6A4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.55■□□□□ 0.08
Trav12d-3A0A075B6A4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav12d-3A0A075B6A4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav12d-3A0A075B6A4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trav12d-3A0A075B6A4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12d-3A0A075B6A4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12d-3A0A075B6A4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav12d-3A0A075B6A4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav12d-3A0A075B6A4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12d-3A0A075B6A4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav12d-3A0A075B6A4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12d-3A0A075B6A4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12d-3A0A075B6A4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav12d-3A0A075B6A4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav12d-3A0A075B6A4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav12d-3A0A075B6A4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav12d-3A0A075B6A4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12d-3A0A075B6A4 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.53■□□□□ 0.08
Trav12d-3A0A075B6A4 Zfp131-205ENSMUST00000223812 663 ntBASIC15.53■□□□□ 0.08
Trav12d-3A0A075B6A4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12d-3A0A075B6A4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12d-3A0A075B6A4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12d-3A0A075B6A4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav12d-3A0A075B6A4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12d-3A0A075B6A4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12d-3A0A075B6A4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav12d-3A0A075B6A4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav12d-3A0A075B6A4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav12d-3A0A075B6A4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav12d-3A0A075B6A4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trav12d-3A0A075B6A4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav12d-3A0A075B6A4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav12d-3A0A075B6A4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav12d-3A0A075B6A4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC15.52■□□□□ 0.08
Trav12d-3A0A075B6A4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Trav12d-3A0A075B6A4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav12d-3A0A075B6A4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav12d-3A0A075B6A4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav12d-3A0A075B6A4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav12d-3A0A075B6A4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12d-3A0A075B6A4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12d-3A0A075B6A4 Gm9397-201ENSMUST00000200125 605 ntBASIC15.51■□□□□ 0.07
Trav12d-3A0A075B6A4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav12d-3A0A075B6A4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12d-3A0A075B6A4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12d-3A0A075B6A4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12d-3A0A075B6A4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC15.5■□□□□ 0.07
Trav12d-3A0A075B6A4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12d-3A0A075B6A4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12d-3A0A075B6A4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12d-3A0A075B6A4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12d-3A0A075B6A4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12d-3A0A075B6A4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12d-3A0A075B6A4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Trav12d-3A0A075B6A4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trav12d-3A0A075B6A4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12d-3A0A075B6A4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12d-3A0A075B6A4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12d-3A0A075B6A4 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12d-3A0A075B6A4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-3A0A075B6A4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav12d-3A0A075B6A4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-3A0A075B6A4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-3A0A075B6A4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-3A0A075B6A4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-3A0A075B6A4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Trav12d-3A0A075B6A4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-3A0A075B6A4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-3A0A075B6A4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-3A0A075B6A4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-3A0A075B6A4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-3A0A075B6A4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-3A0A075B6A4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav12d-3A0A075B6A4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.48■□□□□ 0.07
Trav12d-3A0A075B6A4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-3A0A075B6A4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav12d-3A0A075B6A4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav12d-3A0A075B6A4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav12d-3A0A075B6A4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms