Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav18A0A075B656 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav18A0A075B656 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav18A0A075B656 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav18A0A075B656 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17■□□□□ 0.31
Trav18A0A075B656 Mir6538-201ENSMUST00000183713 110 ntBASIC17■□□□□ 0.31
Trav18A0A075B656 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav18A0A075B656 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Trav18A0A075B656 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav18A0A075B656 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav18A0A075B656 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav18A0A075B656 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav18A0A075B656 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trav18A0A075B656 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav18A0A075B656 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav18A0A075B656 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav18A0A075B656 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav18A0A075B656 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.99■□□□□ 0.31
Trav18A0A075B656 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav18A0A075B656 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav18A0A075B656 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav18A0A075B656 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav18A0A075B656 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav18A0A075B656 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav18A0A075B656 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav18A0A075B656 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav18A0A075B656 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trav18A0A075B656 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav18A0A075B656 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.98■□□□□ 0.31
Trav18A0A075B656 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav18A0A075B656 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav18A0A075B656 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav18A0A075B656 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trav18A0A075B656 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trav18A0A075B656 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav18A0A075B656 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav18A0A075B656 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav18A0A075B656 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav18A0A075B656 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav18A0A075B656 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Trav18A0A075B656 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav18A0A075B656 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Trav18A0A075B656 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav18A0A075B656 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trav18A0A075B656 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav18A0A075B656 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav18A0A075B656 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trav18A0A075B656 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav18A0A075B656 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav18A0A075B656 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav18A0A075B656 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav18A0A075B656 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav18A0A075B656 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav18A0A075B656 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav18A0A075B656 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trav18A0A075B656 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav18A0A075B656 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav18A0A075B656 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav18A0A075B656 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav18A0A075B656 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav18A0A075B656 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trav18A0A075B656 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav18A0A075B656 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav18A0A075B656 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.94■□□□□ 0.3
Trav18A0A075B656 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav18A0A075B656 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav18A0A075B656 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav18A0A075B656 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav18A0A075B656 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav18A0A075B656 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.93■□□□□ 0.3
Trav18A0A075B656 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav18A0A075B656 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Trav18A0A075B656 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav18A0A075B656 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav18A0A075B656 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav18A0A075B656 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Trav18A0A075B656 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav18A0A075B656 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav18A0A075B656 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav18A0A075B656 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav18A0A075B656 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.92■□□□□ 0.3
Trav18A0A075B656 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav18A0A075B656 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav18A0A075B656 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav18A0A075B656 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav18A0A075B656 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav18A0A075B656 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav18A0A075B656 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav18A0A075B656 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav18A0A075B656 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav18A0A075B656 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav18A0A075B656 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav18A0A075B656 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trav18A0A075B656 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav18A0A075B656 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.91■□□□□ 0.3
Trav18A0A075B656 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav18A0A075B656 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trav18A0A075B656 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.91■□□□□ 0.3
Trav18A0A075B656 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav18A0A075B656 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms