Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav16A0A075B653 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav16A0A075B653 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC15.98■□□□□ 0.15
Trav16A0A075B653 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav16A0A075B653 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav16A0A075B653 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav16A0A075B653 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav16A0A075B653 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav16A0A075B653 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav16A0A075B653 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav16A0A075B653 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav16A0A075B653 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trav16A0A075B653 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.97■□□□□ 0.15
Trav16A0A075B653 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav16A0A075B653 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav16A0A075B653 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav16A0A075B653 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav16A0A075B653 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav16A0A075B653 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Trav16A0A075B653 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC15.96■□□□□ 0.15
Trav16A0A075B653 AC167019.3-201ENSMUST00000228225 1266 ntBASIC15.96■□□□□ 0.15
Trav16A0A075B653 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav16A0A075B653 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav16A0A075B653 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav16A0A075B653 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav16A0A075B653 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav16A0A075B653 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav16A0A075B653 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Trav16A0A075B653 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav16A0A075B653 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav16A0A075B653 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav16A0A075B653 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav16A0A075B653 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav16A0A075B653 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav16A0A075B653 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Trav16A0A075B653 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav16A0A075B653 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav16A0A075B653 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav16A0A075B653 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav16A0A075B653 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav16A0A075B653 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav16A0A075B653 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav16A0A075B653 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav16A0A075B653 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trav16A0A075B653 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav16A0A075B653 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav16A0A075B653 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav16A0A075B653 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav16A0A075B653 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav16A0A075B653 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC15.93■□□□□ 0.14
Trav16A0A075B653 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav16A0A075B653 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav16A0A075B653 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav16A0A075B653 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav16A0A075B653 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav16A0A075B653 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav16A0A075B653 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav16A0A075B653 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav16A0A075B653 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav16A0A075B653 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav16A0A075B653 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav16A0A075B653 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav16A0A075B653 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav16A0A075B653 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav16A0A075B653 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav16A0A075B653 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav16A0A075B653 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav16A0A075B653 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav16A0A075B653 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav16A0A075B653 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav16A0A075B653 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav16A0A075B653 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.91■□□□□ 0.14
Trav16A0A075B653 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav16A0A075B653 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav16A0A075B653 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.9■□□□□ 0.14
Trav16A0A075B653 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trav16A0A075B653 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trav16A0A075B653 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav16A0A075B653 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav16A0A075B653 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav16A0A075B653 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav16A0A075B653 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav16A0A075B653 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav16A0A075B653 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav16A0A075B653 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav16A0A075B653 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trav16A0A075B653 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav16A0A075B653 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav16A0A075B653 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Trav16A0A075B653 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.89■□□□□ 0.13
Trav16A0A075B653 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC15.89■□□□□ 0.13
Trav16A0A075B653 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav16A0A075B653 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav16A0A075B653 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav16A0A075B653 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav16A0A075B653 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav16A0A075B653 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav16A0A075B653 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav16A0A075B653 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav16A0A075B653 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms