Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12-3A0A075B648 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12-3A0A075B648 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12-3A0A075B648 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12-3A0A075B648 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12-3A0A075B648 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12-3A0A075B648 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12-3A0A075B648 Gm37136-201ENSMUST00000194368 194 ntBASIC15.18■□□□□ 0.02
Trav12-3A0A075B648 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12-3A0A075B648 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav12-3A0A075B648 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav12-3A0A075B648 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-3A0A075B648 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-3A0A075B648 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-3A0A075B648 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-3A0A075B648 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-3A0A075B648 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-3A0A075B648 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-3A0A075B648 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-3A0A075B648 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-3A0A075B648 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.17■□□□□ 0.02
Trav12-3A0A075B648 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-3A0A075B648 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav12-3A0A075B648 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12-3A0A075B648 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12-3A0A075B648 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav12-3A0A075B648 Gm16148-201ENSMUST00000119653 893 ntBASIC15.16■□□□□ 0.02
Trav12-3A0A075B648 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav12-3A0A075B648 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav12-3A0A075B648 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12-3A0A075B648 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12-3A0A075B648 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav12-3A0A075B648 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trav12-3A0A075B648 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12-3A0A075B648 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav12-3A0A075B648 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Trav12-3A0A075B648 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trav12-3A0A075B648 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-3A0A075B648 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-3A0A075B648 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-3A0A075B648 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-3A0A075B648 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-3A0A075B648 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-3A0A075B648 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-3A0A075B648 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-3A0A075B648 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-3A0A075B648 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-3A0A075B648 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav12-3A0A075B648 Gm44949-201ENSMUST00000206423 1450 ntBASIC15.14■□□□□ 0.01
Trav12-3A0A075B648 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav12-3A0A075B648 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12-3A0A075B648 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12-3A0A075B648 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12-3A0A075B648 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav12-3A0A075B648 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12-3A0A075B648 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12-3A0A075B648 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12-3A0A075B648 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
Trav12-3A0A075B648 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trav12-3A0A075B648 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12-3A0A075B648 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12-3A0A075B648 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12-3A0A075B648 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav12-3A0A075B648 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav12-3A0A075B648 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav12-3A0A075B648 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12-3A0A075B648 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12-3A0A075B648 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12-3A0A075B648 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.12■□□□□ 0.01
Trav12-3A0A075B648 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12-3A0A075B648 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav12-3A0A075B648 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trav12-3A0A075B648 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12-3A0A075B648 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav12-3A0A075B648 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav12-3A0A075B648 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav12-3A0A075B648 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12-3A0A075B648 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12-3A0A075B648 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trav12-3A0A075B648 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12-3A0A075B648 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12-3A0A075B648 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12-3A0A075B648 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12-3A0A075B648 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav12-3A0A075B648 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12-3A0A075B648 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav12-3A0A075B648 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12-3A0A075B648 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav12-3A0A075B648 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12-3A0A075B648 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12-3A0A075B648 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav12-3A0A075B648 Gm7199-201ENSMUST00000118327 1485 ntBASIC15.1■□□□□ 0.01
Trav12-3A0A075B648 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12-3A0A075B648 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12-3A0A075B648 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
Trav12-3A0A075B648 AC117245.4-201ENSMUST00000217388 1646 ntBASIC15.1■□□□□ 0.01
Trav12-3A0A075B648 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12-3A0A075B648 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav12-3A0A075B648 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12-3A0A075B648 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms