Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8-1A0A075B641 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8-1A0A075B641 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8-1A0A075B641 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8-1A0A075B641 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8-1A0A075B641 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav8-1A0A075B641 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8-1A0A075B641 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8-1A0A075B641 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8-1A0A075B641 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8-1A0A075B641 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Trav8-1A0A075B641 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8-1A0A075B641 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8-1A0A075B641 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8-1A0A075B641 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav8-1A0A075B641 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8-1A0A075B641 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8-1A0A075B641 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav8-1A0A075B641 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8-1A0A075B641 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8-1A0A075B641 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
Trav8-1A0A075B641 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8-1A0A075B641 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.79□□□□□ -0.04
Trav8-1A0A075B641 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8-1A0A075B641 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8-1A0A075B641 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav8-1A0A075B641 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8-1A0A075B641 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8-1A0A075B641 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8-1A0A075B641 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav8-1A0A075B641 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8-1A0A075B641 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8-1A0A075B641 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8-1A0A075B641 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trav8-1A0A075B641 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8-1A0A075B641 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8-1A0A075B641 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8-1A0A075B641 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8-1A0A075B641 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trav8-1A0A075B641 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8-1A0A075B641 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8-1A0A075B641 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8-1A0A075B641 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8-1A0A075B641 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8-1A0A075B641 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8-1A0A075B641 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8-1A0A075B641 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8-1A0A075B641 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8-1A0A075B641 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8-1A0A075B641 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8-1A0A075B641 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8-1A0A075B641 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav8-1A0A075B641 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav8-1A0A075B641 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav8-1A0A075B641 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav8-1A0A075B641 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8-1A0A075B641 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav8-1A0A075B641 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8-1A0A075B641 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8-1A0A075B641 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8-1A0A075B641 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8-1A0A075B641 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8-1A0A075B641 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8-1A0A075B641 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8-1A0A075B641 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8-1A0A075B641 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8-1A0A075B641 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8-1A0A075B641 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8-1A0A075B641 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8-1A0A075B641 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8-1A0A075B641 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8-1A0A075B641 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8-1A0A075B641 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8-1A0A075B641 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.75□□□□□ -0.05
Trav8-1A0A075B641 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8-1A0A075B641 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8-1A0A075B641 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav8-1A0A075B641 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8-1A0A075B641 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav8-1A0A075B641 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trav8-1A0A075B641 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8-1A0A075B641 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8-1A0A075B641 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8-1A0A075B641 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8-1A0A075B641 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav8-1A0A075B641 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8-1A0A075B641 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav8-1A0A075B641 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC14.74□□□□□ -0.05
Trav8-1A0A075B641 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC14.74□□□□□ -0.05
Trav8-1A0A075B641 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8-1A0A075B641 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8-1A0A075B641 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8-1A0A075B641 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8-1A0A075B641 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8-1A0A075B641 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav8-1A0A075B641 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8-1A0A075B641 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8-1A0A075B641 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8-1A0A075B641 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Trav8-1A0A075B641 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms