Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-1A0A075B606 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-1A0A075B606 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.17■□□□□ 0.02
Trav13d-1A0A075B606 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.17■□□□□ 0.02
Trav13d-1A0A075B606 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav13d-1A0A075B606 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.17■□□□□ 0.02
Trav13d-1A0A075B606 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-1A0A075B606 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-1A0A075B606 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-1A0A075B606 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-1A0A075B606 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-1A0A075B606 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-1A0A075B606 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav13d-1A0A075B606 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.16■□□□□ 0.02
Trav13d-1A0A075B606 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav13d-1A0A075B606 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-1A0A075B606 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav13d-1A0A075B606 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-1A0A075B606 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-1A0A075B606 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-1A0A075B606 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13d-1A0A075B606 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav13d-1A0A075B606 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC15.14■□□□□ 0.01
Trav13d-1A0A075B606 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-1A0A075B606 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-1A0A075B606 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.14■□□□□ 0.01
Trav13d-1A0A075B606 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav13d-1A0A075B606 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-1A0A075B606 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav13d-1A0A075B606 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC15.14■□□□□ 0.01
Trav13d-1A0A075B606 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-1A0A075B606 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13d-1A0A075B606 Gm32051-202ENSMUST00000197905 2385 ntBASIC15.13■□□□□ 0.01
Trav13d-1A0A075B606 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav13d-1A0A075B606 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13d-1A0A075B606 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav13d-1A0A075B606 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav13d-1A0A075B606 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13d-1A0A075B606 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Trav13d-1A0A075B606 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13d-1A0A075B606 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13d-1A0A075B606 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13d-1A0A075B606 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13d-1A0A075B606 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13d-1A0A075B606 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13d-1A0A075B606 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav13d-1A0A075B606 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13d-1A0A075B606 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13d-1A0A075B606 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13d-1A0A075B606 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13d-1A0A075B606 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13d-1A0A075B606 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Trav13d-1A0A075B606 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13d-1A0A075B606 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13d-1A0A075B606 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13d-1A0A075B606 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13d-1A0A075B606 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav13d-1A0A075B606 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13d-1A0A075B606 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13d-1A0A075B606 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.11■□□□□ 0.01
Trav13d-1A0A075B606 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav13d-1A0A075B606 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.11■□□□□ 0.01
Trav13d-1A0A075B606 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav13d-1A0A075B606 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13d-1A0A075B606 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13d-1A0A075B606 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13d-1A0A075B606 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13d-1A0A075B606 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav13d-1A0A075B606 Gm15039-201ENSMUST00000118914 875 ntBASIC15.1■□□□□ 0.01
Trav13d-1A0A075B606 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13d-1A0A075B606 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav13d-1A0A075B606 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13d-1A0A075B606 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13d-1A0A075B606 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13d-1A0A075B606 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13d-1A0A075B606 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13d-1A0A075B606 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13d-1A0A075B606 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13d-1A0A075B606 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav13d-1A0A075B606 Gm22238-201ENSMUST00000175222 88 ntBASIC15.09■□□□□ 0.01
Trav13d-1A0A075B606 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav13d-1A0A075B606 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav13d-1A0A075B606 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13d-1A0A075B606 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13d-1A0A075B606 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Trav13d-1A0A075B606 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13d-1A0A075B606 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13d-1A0A075B606 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13d-1A0A075B606 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13d-1A0A075B606 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13d-1A0A075B606 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav13d-1A0A075B606 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-1A0A075B606 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav13d-1A0A075B606 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-1A0A075B606 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-1A0A075B606 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-1A0A075B606 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.08■□□□□ 0
Trav13d-1A0A075B606 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-1A0A075B606 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-1A0A075B606 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms