Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.7□□□□□ -0.22
AmfrQ9R049 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AmfrQ9R049 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AmfrQ9R049 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AmfrQ9R049 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AmfrQ9R049 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AmfrQ9R049 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AmfrQ9R049 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AmfrQ9R049 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.69□□□□□ -0.22
AmfrQ9R049 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
AmfrQ9R049 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
AmfrQ9R049 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
AmfrQ9R049 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AmfrQ9R049 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.69□□□□□ -0.22
AmfrQ9R049 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
AmfrQ9R049 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AmfrQ9R049 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AmfrQ9R049 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AmfrQ9R049 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AmfrQ9R049 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.69□□□□□ -0.22
AmfrQ9R049 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AmfrQ9R049 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AmfrQ9R049 Gm7584-201ENSMUST00000175829 940 ntBASIC13.69□□□□□ -0.22
AmfrQ9R049 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.69□□□□□ -0.22
AmfrQ9R049 Gm5904-201ENSMUST00000210286 865 ntBASIC13.69□□□□□ -0.22
AmfrQ9R049 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AmfrQ9R049 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AmfrQ9R049 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.69□□□□□ -0.22
AmfrQ9R049 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AmfrQ9R049 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AmfrQ9R049 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
AmfrQ9R049 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
AmfrQ9R049 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AmfrQ9R049 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AmfrQ9R049 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AmfrQ9R049 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AmfrQ9R049 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.69□□□□□ -0.22
AmfrQ9R049 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.69□□□□□ -0.22
AmfrQ9R049 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AmfrQ9R049 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AmfrQ9R049 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
AmfrQ9R049 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
AmfrQ9R049 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
AmfrQ9R049 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.68□□□□□ -0.22
AmfrQ9R049 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.68□□□□□ -0.22
AmfrQ9R049 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 Gm13350-201ENSMUST00000120519 479 ntBASIC13.68□□□□□ -0.22
AmfrQ9R049 Gm14726-201ENSMUST00000120623 896 ntBASIC13.68□□□□□ -0.22
AmfrQ9R049 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
AmfrQ9R049 Rmrp-201ENSMUST00000157463 271 ntBASIC13.68□□□□□ -0.22
AmfrQ9R049 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.68□□□□□ -0.22
AmfrQ9R049 Gm44364-201ENSMUST00000198368 141 ntBASIC13.68□□□□□ -0.22
AmfrQ9R049 Gm44405-201ENSMUST00000198952 126 ntBASIC13.68□□□□□ -0.22
AmfrQ9R049 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.68□□□□□ -0.22
AmfrQ9R049 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.68□□□□□ -0.22
AmfrQ9R049 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.68□□□□□ -0.22
AmfrQ9R049 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.68□□□□□ -0.22
AmfrQ9R049 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.68□□□□□ -0.22
AmfrQ9R049 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.68□□□□□ -0.22
AmfrQ9R049 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
AmfrQ9R049 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
AmfrQ9R049 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
AmfrQ9R049 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
AmfrQ9R049 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
AmfrQ9R049 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.68□□□□□ -0.22
AmfrQ9R049 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.68□□□□□ -0.22
AmfrQ9R049 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
AmfrQ9R049 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.68□□□□□ -0.22
AmfrQ9R049 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
AmfrQ9R049 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AmfrQ9R049 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.67□□□□□ -0.22
AmfrQ9R049 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AmfrQ9R049 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms