Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 Gm7940-201ENSMUST00000218195 769 ntBASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1fQ9JIS7 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 Gm15374-201ENSMUST00000119313 844 ntBASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 Gm23153-201ENSMUST00000175323 313 ntBASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cacna1fQ9JIS7 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.71□□□□□ -0.22
Cacna1fQ9JIS7 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Cacna1fQ9JIS7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Cacna1fQ9JIS7 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Cacna1fQ9JIS7 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cacna1fQ9JIS7 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.71□□□□□ -0.22
Cacna1fQ9JIS7 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.71□□□□□ -0.22
Cacna1fQ9JIS7 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cacna1fQ9JIS7 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.71□□□□□ -0.22
Cacna1fQ9JIS7 Gm29410-201ENSMUST00000188383 694 ntBASIC13.71□□□□□ -0.22
Cacna1fQ9JIS7 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Cacna1fQ9JIS7 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cacna1fQ9JIS7 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cacna1fQ9JIS7 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cacna1fQ9JIS7 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cacna1fQ9JIS7 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Gm26013-201ENSMUST00000104404 119 ntBASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Gm1848-201ENSMUST00000120711 789 ntBASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Gm14585-201ENSMUST00000120713 634 ntBASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Gm25072-201ENSMUST00000175233 235 ntBASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Gm5982-201ENSMUST00000196234 512 ntBASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Gm42816-201ENSMUST00000198433 325 ntBASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.7□□□□□ -0.22
Cacna1fQ9JIS7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms