Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm43084-201ENSMUST00000200696 947 ntBASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Gm43452-201ENSMUST00000201873 991 ntBASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim39Q9ESN2 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Gm12291-201ENSMUST00000121627 311 ntBASIC11.53□□□□□ -0.56
Trim39Q9ESN2 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Gm37293-201ENSMUST00000191658 295 ntBASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Gm19080-201ENSMUST00000196082 550 ntBASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim39Q9ESN2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim39Q9ESN2 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim39Q9ESN2 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trim39Q9ESN2 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trim39Q9ESN2 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Trim39Q9ESN2 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim39Q9ESN2 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.52□□□□□ -0.56
Trim39Q9ESN2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim39Q9ESN2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim39Q9ESN2 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms