Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Lima1Q9ERG0 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lima1Q9ERG0 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lima1Q9ERG0 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lima1Q9ERG0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Lima1Q9ERG0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lima1Q9ERG0 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.09□□□□□ -0.47
Lima1Q9ERG0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lima1Q9ERG0 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Lima1Q9ERG0 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Lima1Q9ERG0 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.08□□□□□ -0.47
Lima1Q9ERG0 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Lima1Q9ERG0 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Lima1Q9ERG0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.08□□□□□ -0.47
Lima1Q9ERG0 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Gm16177-201ENSMUST00000120728 718 ntBASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Gm17150-201ENSMUST00000165577 381 ntBASIC12.08□□□□□ -0.48
Lima1Q9ERG0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Gm26927-201ENSMUST00000182385 965 ntBASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.08□□□□□ -0.48
Lima1Q9ERG0 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Gm12390-201ENSMUST00000117897 397 ntBASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Gm25927-201ENSMUST00000175058 117 ntBASIC12.07□□□□□ -0.48
Lima1Q9ERG0 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Gm19163-201ENSMUST00000223313 780 ntBASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.07□□□□□ -0.48
Lima1Q9ERG0 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lima1Q9ERG0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lima1Q9ERG0 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Lima1Q9ERG0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lima1Q9ERG0 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lima1Q9ERG0 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lima1Q9ERG0 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Lima1Q9ERG0 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lima1Q9ERG0 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.06□□□□□ -0.48
Lima1Q9ERG0 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lima1Q9ERG0 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.06□□□□□ -0.48
Lima1Q9ERG0 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms