Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Gm24231-201ENSMUST00000104315 133 ntBASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Gm23363-201ENSMUST00000175024 79 ntBASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Gm21769-201ENSMUST00000211922 111 ntBASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Gm11964-201ENSMUST00000120982 444 ntBASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Gm13316-201ENSMUST00000140537 691 ntBASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Gm20482-202ENSMUST00000174729 825 ntBASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tubb3Q9ERD7 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Gm38241-201ENSMUST00000192641 898 ntBASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Gm37259-201ENSMUST00000193903 849 ntBASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms