Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-4Q9EQM3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.52□□□□□ -0.4
Nkx2-4Q9EQM3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-4Q9EQM3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-4Q9EQM3 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
Nkx2-4Q9EQM3 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Nkx2-4Q9EQM3 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-4Q9EQM3 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-4Q9EQM3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-4Q9EQM3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Nkx2-4Q9EQM3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Gm12164-201ENSMUST00000121695 551 ntBASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Gm11354-201ENSMUST00000121974 422 ntBASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-4Q9EQM3 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Mir6407-201ENSMUST00000184510 101 ntBASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Gm18711-201ENSMUST00000199341 750 ntBASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Gm23680-201ENSMUST00000083162 164 ntBASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-4Q9EQM3 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms