Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Gm5354-201ENSMUST00000182417 973 ntBASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Gm20949-201ENSMUST00000206478 952 ntBASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Itm2b-204ENSMUST00000228637 783 ntBASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn3Q9DCB1 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms