Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gm11941-201ENSMUST00000119904 610 ntBASIC14.59□□□□□ -0.07
Stag1Q9D3E6 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Gm3332-201ENSMUST00000189337 928 ntBASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Gm5733-201ENSMUST00000190232 939 ntBASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Gm43184-201ENSMUST00000197247 542 ntBASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Gm18711-201ENSMUST00000199341 750 ntBASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Gm807-202ENSMUST00000224929 408 ntBASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Stag1Q9D3E6 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Stag1Q9D3E6 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Stag1Q9D3E6 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Stag1Q9D3E6 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Gm7851-201ENSMUST00000117574 323 ntBASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Gm11511-201ENSMUST00000118146 540 ntBASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Gm4482-201ENSMUST00000200876 742 ntBASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.58□□□□□ -0.08
Stag1Q9D3E6 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Gm18556-201ENSMUST00000219748 1031 ntBASIC14.58□□□□□ -0.08
Stag1Q9D3E6 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Stag1Q9D3E6 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Gm23912-201ENSMUST00000104687 87 ntBASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Gm15432-201ENSMUST00000121106 195 ntBASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Gm8343-201ENSMUST00000182705 994 ntBASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Gm3508-201ENSMUST00000186012 792 ntBASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Gm37246-201ENSMUST00000192665 835 ntBASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Gm4157-201ENSMUST00000211647 679 ntBASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
Stag1Q9D3E6 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms