Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chaf1bQ9D0N7 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chaf1bQ9D0N7 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.48□□□□□ -0.57
Chaf1bQ9D0N7 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chaf1bQ9D0N7 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chaf1bQ9D0N7 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chaf1bQ9D0N7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chaf1bQ9D0N7 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chaf1bQ9D0N7 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chaf1bQ9D0N7 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chaf1bQ9D0N7 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Chaf1bQ9D0N7 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Chaf1bQ9D0N7 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chaf1bQ9D0N7 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.48□□□□□ -0.57
Chaf1bQ9D0N7 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chaf1bQ9D0N7 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chaf1bQ9D0N7 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chaf1bQ9D0N7 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Chaf1bQ9D0N7 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Chaf1bQ9D0N7 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Chaf1bQ9D0N7 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.48□□□□□ -0.57
Chaf1bQ9D0N7 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Chaf1bQ9D0N7 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chaf1bQ9D0N7 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Snord83b-201ENSMUST00000104546 94 ntBASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Gm15920-201ENSMUST00000118998 402 ntBASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Gm13612-201ENSMUST00000119276 390 ntBASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chaf1bQ9D0N7 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.46□□□□□ -0.57
Chaf1bQ9D0N7 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms