Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Gm11424-201ENSMUST00000121929 829 ntBASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.59□□□□□ -0.39
Snf8Q9CZ28 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snf8Q9CZ28 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.58□□□□□ -0.39
Snf8Q9CZ28 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Snf8Q9CZ28 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Snf8Q9CZ28 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Gm12314-201ENSMUST00000118104 538 ntBASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Gm27486-201ENSMUST00000184923 80 ntBASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Gm44958-201ENSMUST00000203734 736 ntBASIC12.58□□□□□ -0.4
Snf8Q9CZ28 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Gm5035-201ENSMUST00000215581 927 ntBASIC12.58□□□□□ -0.4
Snf8Q9CZ28 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Snf8Q9CZ28 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms