Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssu72Q9CY97 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssu72Q9CY97 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ssu72Q9CY97 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssu72Q9CY97 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ssu72Q9CY97 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.13□□□□□ -0.47
Ssu72Q9CY97 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssu72Q9CY97 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.13□□□□□ -0.47
Ssu72Q9CY97 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssu72Q9CY97 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ssu72Q9CY97 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ssu72Q9CY97 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssu72Q9CY97 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssu72Q9CY97 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ssu72Q9CY97 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Gm11439-201ENSMUST00000118598 409 ntBASIC12.12□□□□□ -0.47
Ssu72Q9CY97 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Gm45925-201ENSMUST00000218882 744 ntBASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Gm5781-201ENSMUST00000219792 443 ntBASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssu72Q9CY97 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Cog3-203ENSMUST00000227473 4197 ntBASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Gm26927-201ENSMUST00000182385 965 ntBASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Gm18018-201ENSMUST00000198273 408 ntBASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Gm44405-201ENSMUST00000198952 126 ntBASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Gm29705-201ENSMUST00000212598 474 ntBASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.11□□□□□ -0.47
Ssu72Q9CY97 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Gm10076-201ENSMUST00000073238 384 ntBASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms