Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldnd1Q9CQX5 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Gm16166-201ENSMUST00000118291 787 ntBASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Gm29410-201ENSMUST00000188383 694 ntBASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Gm5100-201ENSMUST00000195631 589 ntBASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Gm5714-201ENSMUST00000197343 566 ntBASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Gm7902-201ENSMUST00000198842 947 ntBASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Gm43778-201ENSMUST00000199438 199 ntBASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Gm35713-201ENSMUST00000210516 199 ntBASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldnd1Q9CQX5 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Gm12990-201ENSMUST00000120372 468 ntBASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Gm15744-201ENSMUST00000161734 213 ntBASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms