Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Gm5616-201ENSMUST00000165252 384 ntBASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Gm17040-202ENSMUST00000170597 889 ntBASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Gm8741-201ENSMUST00000174736 384 ntBASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Gm17827-201ENSMUST00000211825 742 ntBASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.35□□□□□ -0.43
Lsm7Q9CQQ8 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Gm37666-201ENSMUST00000194110 866 ntBASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm7Q9CQQ8 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Lsm7Q9CQQ8 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.33□□□□□ -0.44
Lsm7Q9CQQ8 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm7Q9CQQ8 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm7Q9CQQ8 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm7Q9CQQ8 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm7Q9CQQ8 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Lsm7Q9CQQ8 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Lsm7Q9CQQ8 Gm23949-201ENSMUST00000104027 127 ntBASIC12.33□□□□□ -0.44
Lsm7Q9CQQ8 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.33□□□□□ -0.44
Lsm7Q9CQQ8 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm7Q9CQQ8 Gm15711-201ENSMUST00000118889 535 ntBASIC12.33□□□□□ -0.44
Lsm7Q9CQQ8 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.33□□□□□ -0.44
Lsm7Q9CQQ8 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.33□□□□□ -0.44
Lsm7Q9CQQ8 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Lsm7Q9CQQ8 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms