Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 AC154767.3-201ENSMUST00000225150 1342 ntBASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Gm26464-201ENSMUST00000157094 305 ntBASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Gm17837-201ENSMUST00000186435 985 ntBASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 AC139580.1-202ENSMUST00000223574 928 ntBASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Rbfox2-208ENSMUST00000227930 1218 ntBASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Mir339-201ENSMUST00000083659 96 ntBASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Gm5124-202ENSMUST00000132683 2083 ntBASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 AC126262.1-201ENSMUST00000221802 1904 ntBASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Gm14921-201ENSMUST00000118643 908 ntBASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Gm19078-201ENSMUST00000206311 727 ntBASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 AC124433.1-202ENSMUST00000224762 1535 ntBASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTRAFQ9CQE8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Gm17230-201ENSMUST00000171194 3942 ntBASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms