Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Gm5187-201ENSMUST00000117317 991 ntBASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Gm13392-201ENSMUST00000117708 150 ntBASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Gm16296-201ENSMUST00000159905 325 ntBASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Gm27514-201ENSMUST00000183692 110 ntBASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Gm42693-201ENSMUST00000196779 631 ntBASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Gm42627-201ENSMUST00000197347 224 ntBASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Gm6013-201ENSMUST00000212264 699 ntBASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Gm45925-201ENSMUST00000218882 744 ntBASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Chmp1b1Q99LU0 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.58□□□□□ -0.55
Chmp1b1Q99LU0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Chmp1b1Q99LU0 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Chmp1b1Q99LU0 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms