Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
RtcbQ99LF4 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC15.06■□□□□ 0
RtcbQ99LF4 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC15.06■□□□□ 0
RtcbQ99LF4 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC15.06■□□□□ 0
RtcbQ99LF4 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC15.06■□□□□ 0
RtcbQ99LF4 AC124433.1-201ENSMUST00000224483 1063 ntBASIC15.06■□□□□ 0
RtcbQ99LF4 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RtcbQ99LF4 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC15.06■□□□□ 0
RtcbQ99LF4 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RtcbQ99LF4 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RtcbQ99LF4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RtcbQ99LF4 Gm7278-201ENSMUST00000119836 1401 ntBASIC15.06■□□□□ 0
RtcbQ99LF4 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC15.06■□□□□ 0
RtcbQ99LF4 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.06■□□□□ 0
RtcbQ99LF4 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RtcbQ99LF4 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RtcbQ99LF4 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RtcbQ99LF4 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.06■□□□□ 0
RtcbQ99LF4 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RtcbQ99LF4 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RtcbQ99LF4 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.05■□□□□ 0
RtcbQ99LF4 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
RtcbQ99LF4 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ 0
RtcbQ99LF4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.05■□□□□ 0
RtcbQ99LF4 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RtcbQ99LF4 Gm37859-201ENSMUST00000195529 2173 ntBASIC15.05■□□□□ 0
RtcbQ99LF4 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RtcbQ99LF4 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
RtcbQ99LF4 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
RtcbQ99LF4 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
RtcbQ99LF4 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
RtcbQ99LF4 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC15.05■□□□□ 0
RtcbQ99LF4 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RtcbQ99LF4 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.05■□□□□ 0
RtcbQ99LF4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.05■□□□□ 0
RtcbQ99LF4 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RtcbQ99LF4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RtcbQ99LF4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RtcbQ99LF4 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RtcbQ99LF4 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RtcbQ99LF4 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC15.05■□□□□ -0
RtcbQ99LF4 Gm14219-201ENSMUST00000120414 288 ntBASIC15.05■□□□□ -0
RtcbQ99LF4 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC15.05■□□□□ -0
RtcbQ99LF4 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC15.05■□□□□ -0
RtcbQ99LF4 Gm24844-201ENSMUST00000158679 127 ntBASIC15.05■□□□□ -0
RtcbQ99LF4 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC15.05■□□□□ -0
RtcbQ99LF4 Gm18367-201ENSMUST00000176139 600 ntBASIC15.05■□□□□ -0
RtcbQ99LF4 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC15.05■□□□□ -0
RtcbQ99LF4 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
RtcbQ99LF4 Gm44506-201ENSMUST00000206278 965 ntBASIC15.05■□□□□ -0
RtcbQ99LF4 Gm45594-201ENSMUST00000211717 241 ntBASIC15.05■□□□□ -0
RtcbQ99LF4 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC15.05■□□□□ -0
RtcbQ99LF4 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC15.05■□□□□ -0
RtcbQ99LF4 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC15.05■□□□□ -0
RtcbQ99LF4 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RtcbQ99LF4 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.05■□□□□ -0
RtcbQ99LF4 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.05■□□□□ -0
RtcbQ99LF4 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RtcbQ99LF4 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RtcbQ99LF4 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
RtcbQ99LF4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RtcbQ99LF4 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RtcbQ99LF4 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
RtcbQ99LF4 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.04■□□□□ -0
RtcbQ99LF4 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.04■□□□□ -0
RtcbQ99LF4 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC15.04■□□□□ -0
RtcbQ99LF4 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.04■□□□□ -0
RtcbQ99LF4 Gm5380-201ENSMUST00000119296 2136 ntBASIC15.04■□□□□ -0
RtcbQ99LF4 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.04■□□□□ -0
RtcbQ99LF4 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RtcbQ99LF4 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RtcbQ99LF4 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC15.04■□□□□ -0
RtcbQ99LF4 Gm12816-201ENSMUST00000118069 1212 ntBASIC15.04■□□□□ -0
RtcbQ99LF4 Gm14942-201ENSMUST00000119642 336 ntBASIC15.04■□□□□ -0
RtcbQ99LF4 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC15.04■□□□□ -0
RtcbQ99LF4 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC15.04■□□□□ -0
RtcbQ99LF4 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC15.04■□□□□ -0
RtcbQ99LF4 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC15.04■□□□□ -0
RtcbQ99LF4 Gm8531-201ENSMUST00000188319 893 ntBASIC15.04■□□□□ -0
RtcbQ99LF4 Gm43692-201ENSMUST00000198236 1062 ntBASIC15.04■□□□□ -0
RtcbQ99LF4 Gm42790-201ENSMUST00000201268 969 ntBASIC15.04■□□□□ -0
RtcbQ99LF4 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC15.04■□□□□ -0
RtcbQ99LF4 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC15.04■□□□□ -0
RtcbQ99LF4 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RtcbQ99LF4 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC15.04■□□□□ -0
RtcbQ99LF4 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RtcbQ99LF4 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RtcbQ99LF4 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RtcbQ99LF4 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RtcbQ99LF4 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RtcbQ99LF4 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC15.04■□□□□ -0
RtcbQ99LF4 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC15.04■□□□□ -0
RtcbQ99LF4 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RtcbQ99LF4 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RtcbQ99LF4 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.03■□□□□ -0
RtcbQ99LF4 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.03■□□□□ -0
RtcbQ99LF4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RtcbQ99LF4 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC15.03■□□□□ -0
RtcbQ99LF4 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.03■□□□□ -0
RtcbQ99LF4 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms