Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.34□□□□□ -0.43
Cdk9Q99J95 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.34□□□□□ -0.43
Cdk9Q99J95 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk9Q99J95 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.33□□□□□ -0.44
Cdk9Q99J95 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.33□□□□□ -0.44
Cdk9Q99J95 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk9Q99J95 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.33□□□□□ -0.44
Cdk9Q99J95 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk9Q99J95 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk9Q99J95 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk9Q99J95 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk9Q99J95 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.33□□□□□ -0.44
Cdk9Q99J95 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk9Q99J95 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.33□□□□□ -0.44
Cdk9Q99J95 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cdk9Q99J95 Gm18473-201ENSMUST00000220543 868 ntBASIC12.33□□□□□ -0.44
Cdk9Q99J95 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cdk9Q99J95 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Cdk9Q99J95 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk9Q99J95 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.33□□□□□ -0.44
Cdk9Q99J95 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk9Q99J95 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk9Q99J95 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk9Q99J95 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk9Q99J95 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk9Q99J95 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.33□□□□□ -0.44
Cdk9Q99J95 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cdk9Q99J95 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk9Q99J95 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.32□□□□□ -0.44
Cdk9Q99J95 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.32□□□□□ -0.44
Cdk9Q99J95 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Btrc-209ENSMUST00000224478 2194 ntBASIC12.32□□□□□ -0.44
Cdk9Q99J95 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.32□□□□□ -0.44
Cdk9Q99J95 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Gm14704-201ENSMUST00000120300 874 ntBASIC12.32□□□□□ -0.44
Cdk9Q99J95 Gm15806-201ENSMUST00000120696 955 ntBASIC12.32□□□□□ -0.44
Cdk9Q99J95 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.32□□□□□ -0.44
Cdk9Q99J95 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cdk9Q99J95 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.32□□□□□ -0.44
Cdk9Q99J95 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.32□□□□□ -0.44
Cdk9Q99J95 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.32□□□□□ -0.44
Cdk9Q99J95 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.32□□□□□ -0.44
Cdk9Q99J95 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk9Q99J95 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.31□□□□□ -0.44
Cdk9Q99J95 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms