Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Gm12029-201ENSMUST00000120073 832 ntBASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Gm17391-201ENSMUST00000171036 126 ntBASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb5Q91XZ5 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Mir7686-201ENSMUST00000200604 57 ntBASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Gm44545-201ENSMUST00000208262 746 ntBASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 AC159103.1-201ENSMUST00000228325 429 ntBASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.38□□□□□ -0.11
Pcdhb5Q91XZ5 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Gm5419-201ENSMUST00000119301 527 ntBASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Gm11667-201ENSMUST00000119828 486 ntBASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Gm9630-201ENSMUST00000178304 885 ntBASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Gm44551-201ENSMUST00000208804 171 ntBASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Pcdhb5Q91XZ5 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms