Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Gm23270-201ENSMUST00000104055 131 ntBASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Gm15547-201ENSMUST00000122152 333 ntBASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Gm6334-201ENSMUST00000207083 228 ntBASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Gm12036-201ENSMUST00000120008 530 ntBASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Gm45865-201ENSMUST00000211815 945 ntBASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhb6Q91XZ4 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Pck2-205ENSMUST00000226352 2784 ntBASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms