Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx41Q91VN6 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Gm27023-201ENSMUST00000182372 285 ntBASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx41Q91VN6 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx41Q91VN6 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx41Q91VN6 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx41Q91VN6 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.08□□□□□ -0.15
Ddx41Q91VN6 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx41Q91VN6 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Ddx41Q91VN6 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
Ddx41Q91VN6 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Rps4l-202ENSMUST00000204242 789 ntBASIC14.08□□□□□ -0.16
Ddx41Q91VN6 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Gm5859-201ENSMUST00000165401 2324 ntBASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Map1b-203ENSMUST00000223725 2669 ntBASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Ddx41Q91VN6 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx41Q91VN6 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx41Q91VN6 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx41Q91VN6 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms