Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a20aQ8VDB9 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a20aQ8VDB9 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a20aQ8VDB9 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a20aQ8VDB9 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a20aQ8VDB9 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Slc6a20aQ8VDB9 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a20aQ8VDB9 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a20aQ8VDB9 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a20aQ8VDB9 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a20aQ8VDB9 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a20aQ8VDB9 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a20aQ8VDB9 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a20aQ8VDB9 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a20aQ8VDB9 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Gm8062-201ENSMUST00000139696 444 ntBASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Gm28882-201ENSMUST00000185504 314 ntBASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a20aQ8VDB9 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Gm12957-201ENSMUST00000117835 377 ntBASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Gm11793-201ENSMUST00000120433 981 ntBASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Gm11434-201ENSMUST00000122379 629 ntBASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Gm43118-201ENSMUST00000199149 775 ntBASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Slc6a20aQ8VDB9 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Slc6a20aQ8VDB9 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Slc6a20aQ8VDB9 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a20aQ8VDB9 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a20aQ8VDB9 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a20aQ8VDB9 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Slc6a20aQ8VDB9 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a20aQ8VDB9 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Slc6a20aQ8VDB9 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a20aQ8VDB9 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a20aQ8VDB9 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Slc6a20aQ8VDB9 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a20aQ8VDB9 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms