Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpap2Q8VC34 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Gm6963-201ENSMUST00000147879 379 ntBASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpap2Q8VC34 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Gm20482-202ENSMUST00000174729 825 ntBASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Gm37259-201ENSMUST00000193903 849 ntBASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rpap2Q8VC34 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpap2Q8VC34 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rpap2Q8VC34 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpap2Q8VC34 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpap2Q8VC34 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rpap2Q8VC34 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpap2Q8VC34 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpap2Q8VC34 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpap2Q8VC34 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpap2Q8VC34 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpap2Q8VC34 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpap2Q8VC34 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpap2Q8VC34 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpap2Q8VC34 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpap2Q8VC34 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpap2Q8VC34 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpap2Q8VC34 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rpap2Q8VC34 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.4□□□□□ -0.26
Rpap2Q8VC34 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
Rpap2Q8VC34 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Rpap2Q8VC34 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.4□□□□□ -0.26
Rpap2Q8VC34 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.4□□□□□ -0.26
Rpap2Q8VC34 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.4□□□□□ -0.26
Rpap2Q8VC34 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.4□□□□□ -0.26
Rpap2Q8VC34 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms