Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Gm14767-201ENSMUST00000121559 586 ntBASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Shd-206ENSMUST00000225145 998 ntBASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc9Q8VC31 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Gm21039-201ENSMUST00000223359 2012 ntBASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Gm27680-201ENSMUST00000184192 160 ntBASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Gm8420-201ENSMUST00000097103 598 ntBASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc9Q8VC31 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Ccdc9Q8VC31 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Ccdc9Q8VC31 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
Ccdc9Q8VC31 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ccdc9Q8VC31 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ccdc9Q8VC31 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.06
Ccdc9Q8VC31 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ccdc9Q8VC31 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ccdc9Q8VC31 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ccdc9Q8VC31 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ccdc9Q8VC31 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Gm6916-202ENSMUST00000205523 195 ntBASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Gm9229-201ENSMUST00000222777 126 ntBASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc9Q8VC31 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms