Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm12058-201ENSMUST00000118614 437 ntBASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Gm14660-201ENSMUST00000119809 575 ntBASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Gm35960-201ENSMUST00000202712 767 ntBASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps39Q8R5L3 Map1b-203ENSMUST00000223725 2669 ntBASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Gm37201-201ENSMUST00000191845 523 ntBASIC12.25□□□□□ -0.45
Vps39Q8R5L3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.25□□□□□ -0.45
Vps39Q8R5L3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vps39Q8R5L3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Gm10434-201ENSMUST00000101158 471 ntBASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Gm24830-201ENSMUST00000102024 166 ntBASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Mir1247-201ENSMUST00000116706 82 ntBASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Gm14999-201ENSMUST00000121039 624 ntBASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.24□□□□□ -0.45
Vps39Q8R5L3 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Gm39404-201ENSMUST00000216350 313 ntBASIC12.24□□□□□ -0.45
Vps39Q8R5L3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms