Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nup35Q8R4R6 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Nup35Q8R4R6 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nup35Q8R4R6 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC9.96□□□□□ -0.81
Nup35Q8R4R6 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nup35Q8R4R6 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.81
Nup35Q8R4R6 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.81
Nup35Q8R4R6 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
Nup35Q8R4R6 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Nup35Q8R4R6 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Nup35Q8R4R6 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Nup35Q8R4R6 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nup35Q8R4R6 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nup35Q8R4R6 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC9.96□□□□□ -0.81
Nup35Q8R4R6 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC9.96□□□□□ -0.81
Nup35Q8R4R6 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nup35Q8R4R6 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nup35Q8R4R6 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nup35Q8R4R6 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Gm11597-201ENSMUST00000121423 964 ntBASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Gm18304-201ENSMUST00000189162 546 ntBASIC9.96□□□□□ -0.82
Nup35Q8R4R6 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Gm7287-201ENSMUST00000205267 602 ntBASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Gm6007-201ENSMUST00000208170 823 ntBASIC9.96□□□□□ -0.82
Nup35Q8R4R6 AC167013.1-201ENSMUST00000228592 202 ntBASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Gm10146-201ENSMUST00000072739 309 ntBASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC9.96□□□□□ -0.82
Nup35Q8R4R6 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC9.96□□□□□ -0.82
Nup35Q8R4R6 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nup35Q8R4R6 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nup35Q8R4R6 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.82
Nup35Q8R4R6 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Gm12203-201ENSMUST00000118235 598 ntBASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Gm11803-201ENSMUST00000119966 444 ntBASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Gm12209-201ENSMUST00000120089 596 ntBASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Gm9083-201ENSMUST00000120423 819 ntBASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Gm14057-201ENSMUST00000120631 482 ntBASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Gm12363-201ENSMUST00000122250 668 ntBASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Gm8810-201ENSMUST00000172895 754 ntBASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Gm27701-201ENSMUST00000184498 110 ntBASIC9.95□□□□□ -0.82
Nup35Q8R4R6 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Gm5912-201ENSMUST00000122282 1438 ntBASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nup35Q8R4R6 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms