Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.54□□□□□ -0.56
Clrn1Q8K445 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Gm11222-201ENSMUST00000119005 738 ntBASIC11.54□□□□□ -0.56
Clrn1Q8K445 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.54□□□□□ -0.56
Clrn1Q8K445 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.54□□□□□ -0.56
Clrn1Q8K445 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.54□□□□□ -0.56
Clrn1Q8K445 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Cts7-204ENSMUST00000225321 1257 ntBASIC11.54□□□□□ -0.56
Clrn1Q8K445 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.54□□□□□ -0.56
Clrn1Q8K445 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.54□□□□□ -0.56
Clrn1Q8K445 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.54□□□□□ -0.56
Clrn1Q8K445 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.54□□□□□ -0.56
Clrn1Q8K445 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn1Q8K445 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Mir8109-201ENSMUST00000184375 117 ntBASIC11.53□□□□□ -0.56
Clrn1Q8K445 Gm4034-201ENSMUST00000187674 480 ntBASIC11.53□□□□□ -0.56
Clrn1Q8K445 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.53□□□□□ -0.56
Clrn1Q8K445 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.53□□□□□ -0.56
Clrn1Q8K445 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.53□□□□□ -0.56
Clrn1Q8K445 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clrn1Q8K445 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Clrn1Q8K445 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.52□□□□□ -0.56
Clrn1Q8K445 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Clrn1Q8K445 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Clrn1Q8K445 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Clrn1Q8K445 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Clrn1Q8K445 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.56
Clrn1Q8K445 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Clrn1Q8K445 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Clrn1Q8K445 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Clrn1Q8K445 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms