Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Gm22594-201ENSMUST00000104251 130 ntBASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Gm11560-201ENSMUST00000117567 948 ntBASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Gm12164-201ENSMUST00000121695 551 ntBASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Gm26368-201ENSMUST00000157826 118 ntBASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Gm17214-201ENSMUST00000164501 541 ntBASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Gm12407-201ENSMUST00000180219 324 ntBASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 AC158388.3-202ENSMUST00000225517 775 ntBASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Gm16380-201ENSMUST00000077997 478 ntBASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.92□□□□□ -0.5
Zc3h3Q8CHP0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Gm11619-201ENSMUST00000117474 237 ntBASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Gm14892-201ENSMUST00000117636 267 ntBASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Gm14213-201ENSMUST00000119778 768 ntBASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Gm24248-201ENSMUST00000157321 322 ntBASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Gm25998-201ENSMUST00000175397 53 ntBASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Gm42433-201ENSMUST00000196806 940 ntBASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Gm8342-201ENSMUST00000209839 757 ntBASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Zc3h3Q8CHP0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zc3h3Q8CHP0 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Zc3h3Q8CHP0 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zc3h3Q8CHP0 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zc3h3Q8CHP0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Zc3h3Q8CHP0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zc3h3Q8CHP0 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zc3h3Q8CHP0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.9□□□□□ -0.5
Zc3h3Q8CHP0 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zc3h3Q8CHP0 Gm14270-201ENSMUST00000118388 846 ntBASIC11.9□□□□□ -0.5
Zc3h3Q8CHP0 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Zc3h3Q8CHP0 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC11.9□□□□□ -0.5
Zc3h3Q8CHP0 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC11.9□□□□□ -0.5
Zc3h3Q8CHP0 Gm4310-201ENSMUST00000177847 889 ntBASIC11.9□□□□□ -0.5
Zc3h3Q8CHP0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms