Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Gm12314-201ENSMUST00000118104 538 ntBASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Gm7584-201ENSMUST00000175829 940 ntBASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Gm18304-201ENSMUST00000189162 546 ntBASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Gm44405-201ENSMUST00000198952 126 ntBASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vcpip1Q8CDG3 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Gm13736-201ENSMUST00000119272 253 ntBASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Gm23119-201ENSMUST00000158610 140 ntBASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Gm4857-201ENSMUST00000192718 785 ntBASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vcpip1Q8CDG3 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Vcpip1Q8CDG3 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Vcpip1Q8CDG3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Vcpip1Q8CDG3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Vcpip1Q8CDG3 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Vcpip1Q8CDG3 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms