Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Alx1Q8C8B0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Alx1Q8C8B0 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Alx1Q8C8B0 AC122840.1-201ENSMUST00000220915 3334 ntBASIC14.24□□□□□ -0.13
Alx1Q8C8B0 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Alx1Q8C8B0 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Alx1Q8C8B0 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.24□□□□□ -0.13
Alx1Q8C8B0 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Alx1Q8C8B0 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Alx1Q8C8B0 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Alx1Q8C8B0 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Alx1Q8C8B0 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Alx1Q8C8B0 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Gm15004-201ENSMUST00000119192 630 ntBASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Gm27341-201ENSMUST00000183570 106 ntBASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Gm28071-201ENSMUST00000190355 478 ntBASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alx1Q8C8B0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.22□□□□□ -0.13
Alx1Q8C8B0 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Gm5705-201ENSMUST00000066241 711 ntBASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alx1Q8C8B0 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alx1Q8C8B0 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms