Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Gm14726-201ENSMUST00000120623 896 ntBASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Gm15547-201ENSMUST00000122152 333 ntBASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.47□□□□□ -0.25
Trim9Q8C7M3 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Gm14644-201ENSMUST00000116671 647 ntBASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Gm12015-201ENSMUST00000117065 843 ntBASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Gm45865-201ENSMUST00000211815 945 ntBASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.47□□□□□ -0.25
Trim9Q8C7M3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim9Q8C7M3 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim9Q8C7M3 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim9Q8C7M3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim9Q8C7M3 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.46□□□□□ -0.25
Trim9Q8C7M3 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trim9Q8C7M3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trim9Q8C7M3 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim9Q8C7M3 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim9Q8C7M3 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.46□□□□□ -0.25
Trim9Q8C7M3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim9Q8C7M3 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim9Q8C7M3 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim9Q8C7M3 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim9Q8C7M3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trim9Q8C7M3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.46□□□□□ -0.25
Trim9Q8C7M3 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.46□□□□□ -0.25
Trim9Q8C7M3 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim9Q8C7M3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim9Q8C7M3 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.46□□□□□ -0.25
Trim9Q8C7M3 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim9Q8C7M3 Gm31256-201ENSMUST00000194705 506 ntBASIC13.46□□□□□ -0.25
Trim9Q8C7M3 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim9Q8C7M3 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms