Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Gm23119-201ENSMUST00000158610 140 ntBASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Gm9645-201ENSMUST00000197131 792 ntBASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Col6a6Q8C6K9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a6Q8C6K9 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col6a6Q8C6K9 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Col6a6Q8C6K9 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.64
Col6a6Q8C6K9 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Col6a6Q8C6K9 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.02□□□□□ -0.64
Col6a6Q8C6K9 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Col6a6Q8C6K9 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col6a6Q8C6K9 Gm29499-201ENSMUST00000189151 486 ntBASIC11.02□□□□□ -0.64
Col6a6Q8C6K9 Gm28329-201ENSMUST00000191208 689 ntBASIC11.02□□□□□ -0.64
Col6a6Q8C6K9 Gm29171-201ENSMUST00000191397 486 ntBASIC11.02□□□□□ -0.64
Col6a6Q8C6K9 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col6a6Q8C6K9 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Col6a6Q8C6K9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.02□□□□□ -0.64
Col6a6Q8C6K9 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Col6a6Q8C6K9 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col6a6Q8C6K9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col6a6Q8C6K9 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a6Q8C6K9 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms