Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Gm44651-201ENSMUST00000207343 372 ntBASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Gm17931-201ENSMUST00000208132 634 ntBASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.28□□□□□ -0.12
Usp44Q8C2S0 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp44Q8C2S0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp44Q8C2S0 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Usp44Q8C2S0 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp44Q8C2S0 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Usp44Q8C2S0 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp44Q8C2S0 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp44Q8C2S0 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp44Q8C2S0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp44Q8C2S0 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp44Q8C2S0 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp44Q8C2S0 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp44Q8C2S0 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp44Q8C2S0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp44Q8C2S0 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp44Q8C2S0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp44Q8C2S0 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.27□□□□□ -0.13
Usp44Q8C2S0 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.27□□□□□ -0.13
Usp44Q8C2S0 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.27□□□□□ -0.13
Usp44Q8C2S0 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.27□□□□□ -0.13
Usp44Q8C2S0 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.27□□□□□ -0.13
Usp44Q8C2S0 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp44Q8C2S0 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp44Q8C2S0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp44Q8C2S0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp44Q8C2S0 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp44Q8C2S0 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.27□□□□□ -0.13
Usp44Q8C2S0 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp44Q8C2S0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp44Q8C2S0 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.27□□□□□ -0.13
Usp44Q8C2S0 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.27□□□□□ -0.13
Usp44Q8C2S0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp44Q8C2S0 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Usp44Q8C2S0 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Gm13296-201ENSMUST00000117854 997 ntBASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Gm15610-201ENSMUST00000120584 195 ntBASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Gm13665-201ENSMUST00000120830 528 ntBASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.26□□□□□ -0.13
Usp44Q8C2S0 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.26□□□□□ -0.13
Usp44Q8C2S0 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.26□□□□□ -0.13
Usp44Q8C2S0 AC153929.1-201ENSMUST00000219009 303 ntBASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp44Q8C2S0 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms