Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cps1Q8C196 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cps1Q8C196 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cps1Q8C196 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Cps1Q8C196 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cps1Q8C196 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cps1Q8C196 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cps1Q8C196 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC16.14■□□□□ 0.17
Cps1Q8C196 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cps1Q8C196 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cps1Q8C196 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC16.14■□□□□ 0.17
Cps1Q8C196 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cps1Q8C196 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cps1Q8C196 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cps1Q8C196 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cps1Q8C196 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cps1Q8C196 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cps1Q8C196 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cps1Q8C196 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cps1Q8C196 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cps1Q8C196 Gm12274-201ENSMUST00000120062 385 ntBASIC16.14■□□□□ 0.17
Cps1Q8C196 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cps1Q8C196 Gm26989-201ENSMUST00000182608 749 ntBASIC16.14■□□□□ 0.17
Cps1Q8C196 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC16.14■□□□□ 0.17
Cps1Q8C196 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC16.14■□□□□ 0.17
Cps1Q8C196 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cps1Q8C196 Gm45500-201ENSMUST00000211676 803 ntBASIC16.14■□□□□ 0.17
Cps1Q8C196 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC16.14■□□□□ 0.17
Cps1Q8C196 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cps1Q8C196 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
Cps1Q8C196 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cps1Q8C196 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cps1Q8C196 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cps1Q8C196 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cps1Q8C196 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cps1Q8C196 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cps1Q8C196 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC16.13■□□□□ 0.17
Cps1Q8C196 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cps1Q8C196 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC16.13■□□□□ 0.17
Cps1Q8C196 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cps1Q8C196 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cps1Q8C196 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cps1Q8C196 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cps1Q8C196 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cps1Q8C196 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
Cps1Q8C196 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.13■□□□□ 0.17
Cps1Q8C196 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cps1Q8C196 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC16.13■□□□□ 0.17
Cps1Q8C196 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cps1Q8C196 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cps1Q8C196 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cps1Q8C196 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cps1Q8C196 Gm15036-201ENSMUST00000118880 400 ntBASIC16.13■□□□□ 0.17
Cps1Q8C196 Gm9673-201ENSMUST00000119287 781 ntBASIC16.13■□□□□ 0.17
Cps1Q8C196 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cps1Q8C196 Gm24248-201ENSMUST00000157321 322 ntBASIC16.13■□□□□ 0.17
Cps1Q8C196 Gm37826-201ENSMUST00000195329 322 ntBASIC16.13■□□□□ 0.17
Cps1Q8C196 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cps1Q8C196 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC16.13■□□□□ 0.17
Cps1Q8C196 Gm45758-201ENSMUST00000212448 1006 ntBASIC16.13■□□□□ 0.17
Cps1Q8C196 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cps1Q8C196 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cps1Q8C196 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cps1Q8C196 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cps1Q8C196 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cps1Q8C196 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cps1Q8C196 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cps1Q8C196 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
Cps1Q8C196 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cps1Q8C196 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cps1Q8C196 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cps1Q8C196 Gm43334-201ENSMUST00000197740 1318 ntBASIC16.12■□□□□ 0.17
Cps1Q8C196 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cps1Q8C196 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cps1Q8C196 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cps1Q8C196 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cps1Q8C196 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cps1Q8C196 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cps1Q8C196 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cps1Q8C196 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cps1Q8C196 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cps1Q8C196 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cps1Q8C196 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cps1Q8C196 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Cps1Q8C196 Gm12179-201ENSMUST00000118344 1272 ntBASIC16.12■□□□□ 0.17
Cps1Q8C196 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cps1Q8C196 Gm26047-201ENSMUST00000157308 113 ntBASIC16.12■□□□□ 0.17
Cps1Q8C196 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC16.12■□□□□ 0.17
Cps1Q8C196 Gm26047-202ENSMUST00000198840 115 ntBASIC16.12■□□□□ 0.17
Cps1Q8C196 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cps1Q8C196 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC16.12■□□□□ 0.17
Cps1Q8C196 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC16.12■□□□□ 0.17
Cps1Q8C196 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cps1Q8C196 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cps1Q8C196 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cps1Q8C196 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
Cps1Q8C196 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cps1Q8C196 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.12■□□□□ 0.17
Cps1Q8C196 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cps1Q8C196 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms