Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.59□□□□□ -0.23
Trim47Q8C0E3 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Gm14028-201ENSMUST00000117434 479 ntBASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Gm7722-201ENSMUST00000120646 741 ntBASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC13.59□□□□□ -0.23
Trim47Q8C0E3 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.59□□□□□ -0.23
Trim47Q8C0E3 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim47Q8C0E3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim47Q8C0E3 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.58□□□□□ -0.23
Trim47Q8C0E3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.58□□□□□ -0.23
Trim47Q8C0E3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim47Q8C0E3 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
Trim47Q8C0E3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Trim47Q8C0E3 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.23
Trim47Q8C0E3 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
Trim47Q8C0E3 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Gm44953-201ENSMUST00000208745 1286 ntBASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Gm19324-201ENSMUST00000213229 1169 ntBASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Gm8385-201ENSMUST00000058999 643 ntBASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
Trim47Q8C0E3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim47Q8C0E3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms