Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 Gm17812-201ENSMUST00000204935 318 ntBASIC12.52□□□□□ -0.41
Nup54Q8BTS4 Gm45433-201ENSMUST00000209386 247 ntBASIC12.52□□□□□ -0.41
Nup54Q8BTS4 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 Mir433-201ENSMUST00000093564 124 ntBASIC12.52□□□□□ -0.41
Nup54Q8BTS4 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup54Q8BTS4 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Gm12164-201ENSMUST00000121695 551 ntBASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Gm29199-201ENSMUST00000187766 775 ntBASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Gm18212-201ENSMUST00000211678 889 ntBASIC12.51□□□□□ -0.41
Nup54Q8BTS4 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.51□□□□□ -0.41
Nup54Q8BTS4 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nup54Q8BTS4 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Gm27390-201ENSMUST00000184516 176 ntBASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Gm2260-201ENSMUST00000184965 657 ntBASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Gm37666-201ENSMUST00000194110 866 ntBASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Gm5455-201ENSMUST00000058710 715 ntBASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms