Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Gm14760-201ENSMUST00000121831 999 ntBASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Gm38341-201ENSMUST00000195357 515 ntBASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Morn2-202ENSMUST00000227729 656 ntBASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpsf4Q8BQZ5 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Gm24526-201ENSMUST00000082921 158 ntBASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpsf4Q8BQZ5 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms