Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Gm12957-201ENSMUST00000117835 377 ntBASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Gm14760-201ENSMUST00000121831 999 ntBASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Mir7085-201ENSMUST00000184353 66 ntBASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Gm38002-201ENSMUST00000193255 180 ntBASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.55□□□□□ -0.56
Clrn3Q8BHH8 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Gm22018-201ENSMUST00000104357 131 ntBASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Gm8062-201ENSMUST00000139696 444 ntBASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Gm27023-201ENSMUST00000182372 285 ntBASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Gm6007-201ENSMUST00000208170 823 ntBASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clrn3Q8BHH8 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms