Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Gm38341-201ENSMUST00000195357 515 ntBASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Gm43758-201ENSMUST00000199500 367 ntBASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Gm43822-201ENSMUST00000200285 476 ntBASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Gm9996-201ENSMUST00000070359 913 ntBASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Atg4bQ8BGE6 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Atg4bQ8BGE6 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Atg4bQ8BGE6 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.52□□□□□ -0.56
Atg4bQ8BGE6 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Atg4bQ8BGE6 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Gm44364-201ENSMUST00000198368 141 ntBASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Gm3961-201ENSMUST00000204425 994 ntBASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Gm10312-201ENSMUST00000078515 489 ntBASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Olfr582-201ENSMUST00000098212 960 ntBASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Atg4bQ8BGE6 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 106.2 ms