Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Usp6nlQ80XC3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Usp6nlQ80XC3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.53□□□□□ -0.24
Usp6nlQ80XC3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Usp6nlQ80XC3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Usp6nlQ80XC3 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Usp6nlQ80XC3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Usp6nlQ80XC3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Usp6nlQ80XC3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Usp6nlQ80XC3 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Usp6nlQ80XC3 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Usp6nlQ80XC3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Usp6nlQ80XC3 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Usp6nlQ80XC3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Usp6nlQ80XC3 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Gm11628-201ENSMUST00000117568 171 ntBASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Gm45398-201ENSMUST00000210561 165 ntBASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp6nlQ80XC3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Gm12164-201ENSMUST00000121695 551 ntBASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Usp6nlQ80XC3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.5□□□□□ -0.25
Usp6nlQ80XC3 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms