Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Gm37201-201ENSMUST00000191845 523 ntBASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc116Q80X53 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12□□□□□ -0.49
Ccdc116Q80X53 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ccdc116Q80X53 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccdc116Q80X53 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Gm24830-201ENSMUST00000102024 166 ntBASIC12□□□□□ -0.49
Ccdc116Q80X53 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12□□□□□ -0.49
Ccdc116Q80X53 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Gm8801-201ENSMUST00000173255 1064 ntBASIC12□□□□□ -0.49
Ccdc116Q80X53 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12□□□□□ -0.49
Ccdc116Q80X53 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Gm37424-201ENSMUST00000191727 561 ntBASIC12□□□□□ -0.49
Ccdc116Q80X53 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12□□□□□ -0.49
Ccdc116Q80X53 Gm43118-201ENSMUST00000199149 775 ntBASIC12□□□□□ -0.49
Ccdc116Q80X53 Gm9004-201ENSMUST00000218739 1222 ntBASIC12□□□□□ -0.49
Ccdc116Q80X53 Gm9823-201ENSMUST00000051212 327 ntBASIC12□□□□□ -0.49
Ccdc116Q80X53 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ccdc116Q80X53 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ccdc116Q80X53 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Gm26232-201ENSMUST00000083360 166 ntBASIC12□□□□□ -0.49
Ccdc116Q80X53 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12□□□□□ -0.49
Ccdc116Q80X53 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12□□□□□ -0.49
Ccdc116Q80X53 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Gm44086-201ENSMUST00000203251 2349 ntBASIC12□□□□□ -0.49
Ccdc116Q80X53 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ccdc116Q80X53 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Gm19221-201ENSMUST00000221827 1477 ntBASIC12□□□□□ -0.49
Ccdc116Q80X53 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccdc116Q80X53 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ccdc116Q80X53 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc116Q80X53 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Ccdc116Q80X53 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Ccdc116Q80X53 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc116Q80X53 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc116Q80X53 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc116Q80X53 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc116Q80X53 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Ccdc116Q80X53 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc116Q80X53 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc116Q80X53 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc116Q80X53 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc116Q80X53 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc116Q80X53 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc116Q80X53 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.99□□□□□ -0.49
Ccdc116Q80X53 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Ccdc116Q80X53 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc116Q80X53 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc116Q80X53 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc116Q80X53 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc116Q80X53 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc116Q80X53 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc116Q80X53 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc116Q80X53 Mir1247-201ENSMUST00000116706 82 ntBASIC11.99□□□□□ -0.49
Ccdc116Q80X53 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.99□□□□□ -0.49
Ccdc116Q80X53 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc116Q80X53 Gm24845-201ENSMUST00000158034 109 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms