Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Srrm3Q80WV7 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Srrm3Q80WV7 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Srrm3Q80WV7 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.8□□□□□ -0.36
Srrm3Q80WV7 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.8□□□□□ -0.36
Srrm3Q80WV7 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.8□□□□□ -0.36
Srrm3Q80WV7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.8□□□□□ -0.36
Srrm3Q80WV7 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.8□□□□□ -0.36
Srrm3Q80WV7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Srrm3Q80WV7 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Srrm3Q80WV7 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Srrm3Q80WV7 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Srrm3Q80WV7 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Srrm3Q80WV7 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Srrm3Q80WV7 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Srrm3Q80WV7 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.8□□□□□ -0.36
Srrm3Q80WV7 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Gm37986-201ENSMUST00000193285 383 ntBASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Gm43118-201ENSMUST00000199149 775 ntBASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Gm38671-201ENSMUST00000200573 130 ntBASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Gm44069-201ENSMUST00000204898 506 ntBASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Gm6458-201ENSMUST00000211573 635 ntBASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.79□□□□□ -0.36
Srrm3Q80WV7 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Rps4l-202ENSMUST00000204242 789 ntBASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Srrm3Q80WV7 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms