Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.3□□□□□ -0.44
Usp8Q80U87 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.3□□□□□ -0.44
Usp8Q80U87 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.3□□□□□ -0.44
Usp8Q80U87 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Usp8Q80U87 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.3□□□□□ -0.44
Usp8Q80U87 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.3□□□□□ -0.44
Usp8Q80U87 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.3□□□□□ -0.44
Usp8Q80U87 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Usp8Q80U87 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.3□□□□□ -0.44
Usp8Q80U87 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Usp8Q80U87 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Usp8Q80U87 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.3□□□□□ -0.44
Usp8Q80U87 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.3□□□□□ -0.44
Usp8Q80U87 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 Gm12390-201ENSMUST00000117897 397 ntBASIC12.3□□□□□ -0.44
Usp8Q80U87 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.3□□□□□ -0.44
Usp8Q80U87 Gm11964-201ENSMUST00000120982 444 ntBASIC12.3□□□□□ -0.44
Usp8Q80U87 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.3□□□□□ -0.44
Usp8Q80U87 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.3□□□□□ -0.44
Usp8Q80U87 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.3□□□□□ -0.44
Usp8Q80U87 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Usp8Q80U87 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Usp8Q80U87 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Usp8Q80U87 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.3□□□□□ -0.44
Usp8Q80U87 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.3□□□□□ -0.44
Usp8Q80U87 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.3□□□□□ -0.44
Usp8Q80U87 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.3□□□□□ -0.44
Usp8Q80U87 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Usp8Q80U87 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Usp8Q80U87 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.3□□□□□ -0.44
Usp8Q80U87 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.3□□□□□ -0.44
Usp8Q80U87 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Usp8Q80U87 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.3□□□□□ -0.44
Usp8Q80U87 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp8Q80U87 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Usp8Q80U87 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.29□□□□□ -0.44
Usp8Q80U87 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.29□□□□□ -0.44
Usp8Q80U87 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Usp8Q80U87 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.29□□□□□ -0.44
Usp8Q80U87 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.29□□□□□ -0.44
Usp8Q80U87 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Usp8Q80U87 Gm12384-201ENSMUST00000119228 919 ntBASIC12.29□□□□□ -0.44
Usp8Q80U87 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.29□□□□□ -0.44
Usp8Q80U87 Gm11424-201ENSMUST00000121929 829 ntBASIC12.29□□□□□ -0.44
Usp8Q80U87 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.29□□□□□ -0.44
Usp8Q80U87 Rmrp-201ENSMUST00000157463 271 ntBASIC12.29□□□□□ -0.44
Usp8Q80U87 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.29□□□□□ -0.44
Usp8Q80U87 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.29□□□□□ -0.44
Usp8Q80U87 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.29□□□□□ -0.44
Usp8Q80U87 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.29□□□□□ -0.44
Usp8Q80U87 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Usp8Q80U87 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.29□□□□□ -0.44
Usp8Q80U87 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usp8Q80U87 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms