Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Gm13045-201ENSMUST00000119019 712 ntBASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Gm15432-201ENSMUST00000121106 195 ntBASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Rprl1-202ENSMUST00000198476 238 ntBASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Gm5904-201ENSMUST00000210286 865 ntBASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Gm24749-201ENSMUST00000157838 343 ntBASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf38bQ80SY5 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prpf38bQ80SY5 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms