Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Gm23218-201ENSMUST00000158124 276 ntBASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Gm24844-201ENSMUST00000158679 127 ntBASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Gm3551-201ENSMUST00000190750 664 ntBASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Gm44158-201ENSMUST00000203881 505 ntBASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx55Q6ZPL9 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Gm17877-201ENSMUST00000192578 814 ntBASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx55Q6ZPL9 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx55Q6ZPL9 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms